CDS

Accession Number TCMCG006C85468
gbkey CDS
Protein Id XP_013686765.1
Location complement(join(16076406..16077046,16077129..16077459))
Gene LOC106390777
GeneID 106390777
Organism Brassica napus

Protein

Length 323aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013831311.2
Definition RNA pseudouridine synthase 1-like isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category A
Description Pseudouridine synthase family protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01002        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
KEGG_ko ko:K08675        [VIEW IN KEGG]
EC 3.4.21.53        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0001522        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009982        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016866        [VIEW IN EMBL-EBI]
GO:0031119        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTGCTTCTCCTCTTCTCCTTCGAAACCTCTTCTCAGCTAACAAAATACTTATAAAACCCTATTTCGCCAACTCCGTCAAAGCCATGGAAGCTCGACACGATCTCCCCATAACCAGTCTAGATTACCCTAAACCCATTTCCGCTCCGCCCCCTCCGATCTCGAAAGACATTGAACTCAAAAGAGCCATTGAAGCTTCTTCAAATTCGAGTCTCTTGAATCTTACAAGAGACTATGTGTTATACGAAGACGAATGGCTCATGGCCGTAAATAAGCCAAAAGGTGTCTACTGCGAATCTGTTCTTTCCTCTGCTCCTAAGATCATCGTTGATTCATCGAATGAGTTTCATCTCGCGAATAGATTAGACCGTGACACTAGCGGAGTTATGCTCATAACTAAATCTCATAAAGTCGCTGCTAAGCTCGTTAAAGCGTTCACAGAACACAAGATTCGCAAATCCTACATTGCTCTCTCCATCGGACCATCACCAAACTGGAGCAAGATCACGGTTAAGTCAGGACATGGACGCTCCAAACACGGAGCTTGGCGCGTTTACGCTGCCTTGGACGTTGGTAGGGTCTTACCAGGAGGATCATTCGTTAGAGACATGGAAACAACATTTGAAGTTGTATCCGTGAACGGCGAAAAAAACACCAACACCGAACCTTCTGAATCAGAAAGTATAATTGTTGTCGAGGGCGAACCAGAATTGAGTTGTGTCGGAGACGATGTTGTTGTGGTAAGGGCGTTCCCACAAAGTGGTCGGACGCATCAGATTAGGTTACATTGTCAGTATCTTGGGATTCCGATTAGAGGAGATGTTAAGTATCATGGGATGTATGAATGGAATGGGAGAGCATCCGAGGGTCATGAGCTTCATGCTGAGAGTTTGTCGTTGGATCATCCTGTTACAGGTGATCCTCTTGTTATCCAGGCTCCTCCTCCGTGTTGGGCTGCCGGAGATGTTTAA
Protein:  
MSASPLLLRNLFSANKILIKPYFANSVKAMEARHDLPITSLDYPKPISAPPPPISKDIELKRAIEASSNSSLLNLTRDYVLYEDEWLMAVNKPKGVYCESVLSSAPKIIVDSSNEFHLANRLDRDTSGVMLITKSHKVAAKLVKAFTEHKIRKSYIALSIGPSPNWSKITVKSGHGRSKHGAWRVYAALDVGRVLPGGSFVRDMETTFEVVSVNGEKNTNTEPSESESIIVVEGEPELSCVGDDVVVVRAFPQSGRTHQIRLHCQYLGIPIRGDVKYHGMYEWNGRASEGHELHAESLSLDHPVTGDPLVIQAPPPCWAAGDV